Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC022210.1-201ENST00000449856 793 ntBASIC18.89■□□□□ 0.61
RHBDL3P58872 AC119751.2-201ENST00000504529 210 ntBASIC18.89■□□□□ 0.61
RHBDL3P58872 USP32P1-208ENST00000506594 1164 ntBASIC18.89■□□□□ 0.61
RHBDL3P58872 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.89■□□□□ 0.61
RHBDL3P58872 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 AC017083.2-201ENST00000608069 979 ntBASIC18.89■□□□□ 0.61
RHBDL3P58872 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
RHBDL3P58872 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.89■□□□□ 0.61
RHBDL3P58872 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.89■□□□□ 0.61
RHBDL3P58872 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RHBDL3P58872 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.89■□□□□ 0.61
RHBDL3P58872 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.89■□□□□ 0.61
RHBDL3P58872 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHBDL3P58872 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RHBDL3P58872 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 PCDHA14-201ENST00000506751 2298 ntBASIC18.88■□□□□ 0.61
RHBDL3P58872 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 AL359711.2-201ENST00000563105 872 ntBASIC18.88■□□□□ 0.61
RHBDL3P58872 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RHBDL3P58872 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.88■□□□□ 0.61
RHBDL3P58872 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.88■□□□□ 0.61
RHBDL3P58872 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHBDL3P58872 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
RHBDL3P58872 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RHBDL3P58872 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.87■□□□□ 0.61
RHBDL3P58872 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.87■□□□□ 0.61
RHBDL3P58872 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.87■□□□□ 0.61
RHBDL3P58872 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.87■□□□□ 0.61
RHBDL3P58872 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHBDL3P58872 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.87■□□□□ 0.61
RHBDL3P58872 MIR4259-201ENST00000584466 101 ntBASIC18.87■□□□□ 0.61
RHBDL3P58872 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.87■□□□□ 0.61
RHBDL3P58872 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RHBDL3P58872 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RHBDL3P58872 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.86■□□□□ 0.61
RHBDL3P58872 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.86■□□□□ 0.61
RHBDL3P58872 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.86■□□□□ 0.61
RHBDL3P58872 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.86■□□□□ 0.61
RHBDL3P58872 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RHBDL3P58872 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RHBDL3P58872 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms