Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CLRN1P58418 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CLRN1P58418 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLRN1P58418 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.48□□□□□ -0.09
CLRN1P58418 AC004832.2-201ENST00000426397 482 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 PGAM5P1-201ENST00000518923 814 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 AC105233.2-201ENST00000523697 349 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 AF228730.5-201ENST00000530288 346 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.48□□□□□ -0.09
CLRN1P58418 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 AC092902.6-201ENST00000641783 218 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.48□□□□□ -0.09
CLRN1P58418 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 AL365203.3-201ENST00000609742 2057 ntBASIC14.48□□□□□ -0.09
CLRN1P58418 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLRN1P58418 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.48□□□□□ -0.09
CLRN1P58418 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.47□□□□□ -0.09
CLRN1P58418 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLRN1P58418 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.47□□□□□ -0.09
CLRN1P58418 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.47□□□□□ -0.09
CLRN1P58418 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.47□□□□□ -0.09
CLRN1P58418 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLRN1P58418 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 C20orf181-201ENST00000623918 480 ntBASIC14.47□□□□□ -0.09
CLRN1P58418 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLRN1P58418 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 LINC02447-202ENST00000501888 2146 ntBASIC14.47□□□□□ -0.09
CLRN1P58418 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLRN1P58418 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLRN1P58418 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CLRN1P58418 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.46□□□□□ -0.09
CLRN1P58418 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLRN1P58418 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLRN1P58418 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.46□□□□□ -0.09
CLRN1P58418 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLRN1P58418 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.46□□□□□ -0.09
CLRN1P58418 HAUS4P1-201ENST00000406739 1145 ntBASIC14.46□□□□□ -0.09
CLRN1P58418 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.46□□□□□ -0.09
CLRN1P58418 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms