Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 AP005018.1-201ENST00000525475 301 ntBASIC15.52■□□□□ 0.08
EPHA4P54764 CR383656.12-201ENST00000549567 513 ntBASIC15.52■□□□□ 0.08
EPHA4P54764 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 TP53TG3HP-202ENST00000569755 579 ntBASIC15.52■□□□□ 0.08
EPHA4P54764 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.52■□□□□ 0.08
EPHA4P54764 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.52■□□□□ 0.08
EPHA4P54764 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
EPHA4P54764 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.52■□□□□ 0.08
EPHA4P54764 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
EPHA4P54764 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.52■□□□□ 0.07
EPHA4P54764 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.52■□□□□ 0.07
EPHA4P54764 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.52■□□□□ 0.07
EPHA4P54764 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.52■□□□□ 0.07
EPHA4P54764 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
EPHA4P54764 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.51■□□□□ 0.07
EPHA4P54764 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 HIST3H2BA-201ENST00000436555 524 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.51■□□□□ 0.07
EPHA4P54764 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.51■□□□□ 0.07
EPHA4P54764 API5-211ENST00000534695 560 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.51■□□□□ 0.07
EPHA4P54764 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
EPHA4P54764 SRD5A3P1-201ENST00000603021 949 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 AL109936.8-201ENST00000641772 604 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 AL596257.1-201ENST00000641463 2694 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
EPHA4P54764 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 PCDHB19P-201ENST00000570871 2371 ntBASIC15.51■□□□□ 0.07
EPHA4P54764 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.51■□□□□ 0.07
EPHA4P54764 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
EPHA4P54764 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EPHA4P54764 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.5■□□□□ 0.07
EPHA4P54764 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EPHA4P54764 REXO1L8P-201ENST00000604378 1897 ntBASIC15.5■□□□□ 0.07
EPHA4P54764 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
EPHA4P54764 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EPHA4P54764 AC106886.4-201ENST00000623557 2502 ntBASIC15.5■□□□□ 0.07
EPHA4P54764 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.5■□□□□ 0.07
EPHA4P54764 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 SPDYE19P-201ENST00000338590 713 ntBASIC15.5■□□□□ 0.07
EPHA4P54764 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.5■□□□□ 0.07
EPHA4P54764 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EPHA4P54764 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.5■□□□□ 0.07
EPHA4P54764 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms