Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 ISCA2P1-201ENST00000425548 448 ntBASIC17.85■□□□□ 0.45
LBX1P52954 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 KRT18P43-201ENST00000469825 1281 ntBASIC17.85■□□□□ 0.45
LBX1P52954 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.85■□□□□ 0.45
LBX1P52954 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 AL118516.1-201ENST00000564152 670 ntBASIC17.85■□□□□ 0.45
LBX1P52954 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 RN7SL163P-201ENST00000583100 276 ntBASIC17.85■□□□□ 0.45
LBX1P52954 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LBX1P52954 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.85■□□□□ 0.45
LBX1P52954 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.85■□□□□ 0.45
LBX1P52954 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LBX1P52954 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 AC116353.5-201ENST00000638148 1699 ntBASIC17.84■□□□□ 0.45
LBX1P52954 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LBX1P52954 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.84■□□□□ 0.45
LBX1P52954 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.84■□□□□ 0.45
LBX1P52954 AP000356.3-201ENST00000382243 753 ntBASIC17.84■□□□□ 0.45
LBX1P52954 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 FAM8A4P-201ENST00000435433 1213 ntBASIC17.84■□□□□ 0.45
LBX1P52954 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 AL031713.1-201ENST00000564813 661 ntBASIC17.84■□□□□ 0.45
LBX1P52954 SAMD11P1-201ENST00000571429 661 ntBASIC17.84■□□□□ 0.45
LBX1P52954 FTLP5-201ENST00000586853 534 ntBASIC17.84■□□□□ 0.45
LBX1P52954 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.84■□□□□ 0.45
LBX1P52954 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.84■□□□□ 0.45
LBX1P52954 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LBX1P52954 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LBX1P52954 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.83■□□□□ 0.45
LBX1P52954 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.83■□□□□ 0.45
LBX1P52954 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.83■□□□□ 0.45
LBX1P52954 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LBX1P52954 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LBX1P52954 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LBX1P52954 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
LBX1P52954 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 ACTBP7-201ENST00000418351 1124 ntBASIC17.83■□□□□ 0.44
LBX1P52954 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.83■□□□□ 0.44
LBX1P52954 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.83■□□□□ 0.44
LBX1P52954 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
LBX1P52954 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
LBX1P52954 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.83■□□□□ 0.44
LBX1P52954 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 BNIP3P13-201ENST00000599968 566 ntBASIC17.83■□□□□ 0.44
LBX1P52954 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.83■□□□□ 0.44
LBX1P52954 AL161773.1-201ENST00000624845 863 ntBASIC17.83■□□□□ 0.44
LBX1P52954 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.83■□□□□ 0.44
LBX1P52954 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.83■□□□□ 0.44
LBX1P52954 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LBX1P52954 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LBX1P52954 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LBX1P52954 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LBX1P52954 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LBX1P52954 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
LBX1P52954 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms