Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GPC3P51654 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC3P51654 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.78■□□□□ 0.44
GPC3P51654 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.78■□□□□ 0.44
GPC3P51654 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.78■□□□□ 0.44
GPC3P51654 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.78■□□□□ 0.44
GPC3P51654 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.78■□□□□ 0.44
GPC3P51654 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 CYP4F24P-201ENST00000586049 1580 ntBASIC17.78■□□□□ 0.44
GPC3P51654 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.78■□□□□ 0.44
GPC3P51654 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GPC3P51654 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.78■□□□□ 0.44
GPC3P51654 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC3P51654 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
GPC3P51654 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 AP005018.1-201ENST00000525475 301 ntBASIC17.77■□□□□ 0.44
GPC3P51654 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.77■□□□□ 0.44
GPC3P51654 AL662799.1-202ENST00000614205 422 ntBASIC17.77■□□□□ 0.44
GPC3P51654 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.77■□□□□ 0.44
GPC3P51654 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.77■□□□□ 0.44
GPC3P51654 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.77■□□□□ 0.44
GPC3P51654 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GPC3P51654 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
GPC3P51654 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.77■□□□□ 0.43
GPC3P51654 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.77■□□□□ 0.43
GPC3P51654 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC3P51654 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.77■□□□□ 0.43
GPC3P51654 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
GPC3P51654 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC3P51654 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC3P51654 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GPC3P51654 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 REXO1L8P-201ENST00000604378 1897 ntBASIC17.76■□□□□ 0.43
GPC3P51654 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GPC3P51654 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
GPC3P51654 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GPC3P51654 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC3P51654 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.76■□□□□ 0.43
GPC3P51654 AC005225.4-201ENST00000557330 545 ntBASIC17.76■□□□□ 0.43
GPC3P51654 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.76■□□□□ 0.43
GPC3P51654 AC104794.3-201ENST00000566840 1248 ntBASIC17.76■□□□□ 0.43
GPC3P51654 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms