Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.88■□□□□ 0.45
CENPFP49454 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CENPFP49454 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.88■□□□□ 0.45
CENPFP49454 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.88■□□□□ 0.45
CENPFP49454 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.88■□□□□ 0.45
CENPFP49454 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 AL590640.2-201ENST00000457038 527 ntBASIC17.88■□□□□ 0.45
CENPFP49454 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CENPFP49454 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.88■□□□□ 0.45
CENPFP49454 AP001063.1-201ENST00000568332 529 ntBASIC17.88■□□□□ 0.45
CENPFP49454 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPFP49454 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.87■□□□□ 0.45
CENPFP49454 AC234644.1-201ENST00000406065 370 ntBASIC17.87■□□□□ 0.45
CENPFP49454 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.87■□□□□ 0.45
CENPFP49454 MAGEA5-201ENST00000446757 942 ntBASIC17.87■□□□□ 0.45
CENPFP49454 AC008267.1-201ENST00000474858 1069 ntBASIC17.87■□□□□ 0.45
CENPFP49454 RPSAP36-202ENST00000494591 1261 ntBASIC17.87■□□□□ 0.45
CENPFP49454 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 MIR3907-201ENST00000579424 151 ntBASIC17.87■□□□□ 0.45
CENPFP49454 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.87■□□□□ 0.45
CENPFP49454 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 AC244452.3-201ENST00000636814 210 ntBASIC17.87■□□□□ 0.45
CENPFP49454 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 AC134407.2-201ENST00000625089 1978 ntBASIC17.87■□□□□ 0.45
CENPFP49454 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 AC092364.2-201ENST00000596710 2692 ntBASIC17.87■□□□□ 0.45
CENPFP49454 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CENPFP49454 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 AC080080.1-201ENST00000625121 2420 ntBASIC17.87■□□□□ 0.45
CENPFP49454 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CENPFP49454 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 C1QBPP1-201ENST00000400117 770 ntBASIC17.87■□□□□ 0.45
CENPFP49454 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 EEF1DP4-201ENST00000446006 880 ntBASIC17.87■□□□□ 0.45
CENPFP49454 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.87■□□□□ 0.45
CENPFP49454 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.87■□□□□ 0.45
CENPFP49454 AL139011.1-202ENST00000642063 584 ntBASIC17.87■□□□□ 0.45
CENPFP49454 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPFP49454 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CENPFP49454 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPFP49454 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 RN7SL11P-201ENST00000471305 293 ntBASIC17.86■□□□□ 0.45
CENPFP49454 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.86■□□□□ 0.45
CENPFP49454 AC079336.7-201ENST00000623428 1078 ntBASIC17.86■□□□□ 0.45
CENPFP49454 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPFP49454 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.86■□□□□ 0.45
CENPFP49454 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 AZGP1P1-201ENST00000411909 902 ntBASIC17.86■□□□□ 0.45
CENPFP49454 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.86■□□□□ 0.45
CENPFP49454 AC069218.1-201ENST00000435269 762 ntBASIC17.86■□□□□ 0.45
CENPFP49454 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.86■□□□□ 0.45
CENPFP49454 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CENPFP49454 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.86■□□□□ 0.45
CENPFP49454 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms