Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.83□□□□□ -0.36
CDC34P49427 AC083849.1-201ENST00000615227 514 ntBASIC12.83□□□□□ -0.36
CDC34P49427 TMEM191A-211ENST00000637163 1067 ntBASIC12.83□□□□□ -0.36
CDC34P49427 AP000867.4-201ENST00000641616 219 ntBASIC12.83□□□□□ -0.36
CDC34P49427 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 CICP13-201ENST00000422015 2789 ntBASIC12.83□□□□□ -0.36
CDC34P49427 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC12.83□□□□□ -0.36
CDC34P49427 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CDC34P49427 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CDC34P49427 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CDC34P49427 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CDC34P49427 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 LINC01101-201ENST00000622953 1884 ntBASIC12.82□□□□□ -0.36
CDC34P49427 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
CDC34P49427 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 AL137013.1-201ENST00000432946 1228 ntBASIC12.82□□□□□ -0.36
CDC34P49427 AC091607.1-201ENST00000490318 1060 ntBASIC12.82□□□□□ -0.36
CDC34P49427 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.82□□□□□ -0.36
CDC34P49427 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 CYP2A7P1-201ENST00000595391 815 ntBASIC12.82□□□□□ -0.36
CDC34P49427 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.82□□□□□ -0.36
CDC34P49427 ST20-AS1-201ENST00000560255 4223 ntBASIC12.82□□□□□ -0.36
CDC34P49427 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.82□□□□□ -0.36
CDC34P49427 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CDC34P49427 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.82□□□□□ -0.36
CDC34P49427 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CDC34P49427 AC026748.1-201ENST00000624349 3251 ntBASIC12.82□□□□□ -0.36
CDC34P49427 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 AC023908.3-201ENST00000564211 3047 ntBASIC12.81□□□□□ -0.36
CDC34P49427 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDC34P49427 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms