Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 U82695.1-201ENST00000635752 1889 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC9A3P48764 AP003680.1-201ENST00000598970 3660 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC9A3P48764 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 AP005117.1-202ENST00000581724 1908 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 CICP13-201ENST00000422015 2789 ntBASIC14.9□□□□□ -0.02
SLC9A3P48764 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC9A3P48764 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC9A3P48764 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC9A3P48764 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC9A3P48764 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC9A3P48764 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
SLC9A3P48764 AC148477.8-201ENST00000624298 468 ntBASIC14.89□□□□□ -0.03
SLC9A3P48764 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 AC013268.4-201ENST00000637413 2228 ntBASIC14.89□□□□□ -0.03
SLC9A3P48764 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 AC005622.1-201ENST00000636801 1703 ntBASIC14.89□□□□□ -0.03
SLC9A3P48764 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC9A3P48764 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC9A3P48764 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC9A3P48764 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC9A3P48764 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 TNRC18P2-201ENST00000417666 2714 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 AC004870.1-201ENST00000315132 882 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 HMGA1P7-201ENST00000406908 502 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC9A3P48764 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC9A3P48764 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC9A3P48764 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 FAAHP1-202ENST00000446499 1238 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC9A3P48764 AC108751.1-201ENST00000490852 363 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 MIR4751-201ENST00000578027 74 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC9A3P48764 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC9A3P48764 AL773604.1-201ENST00000617417 272 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 CICP14-201ENST00000629111 2732 ntBASIC14.88□□□□□ -0.03
SLC9A3P48764 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SLC9A3P48764 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC9A3P48764 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms