Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
COPB2P35606 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
COPB2P35606 AL592424.1-201ENST00000563624 1536 ntBASIC18.39■□□□□ 0.54
COPB2P35606 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.39■□□□□ 0.53
COPB2P35606 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
COPB2P35606 AC007389.4-201ENST00000454674 793 ntBASIC18.39■□□□□ 0.53
COPB2P35606 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 ACA64.2-201ENST00000459014 129 ntBASIC18.39■□□□□ 0.53
COPB2P35606 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.39■□□□□ 0.53
COPB2P35606 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.39■□□□□ 0.53
COPB2P35606 RAB43P1-201ENST00000561790 589 ntBASIC18.39■□□□□ 0.53
COPB2P35606 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.39■□□□□ 0.53
COPB2P35606 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.39■□□□□ 0.53
COPB2P35606 CTBP2P3-201ENST00000585629 1255 ntBASIC18.39■□□□□ 0.53
COPB2P35606 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
COPB2P35606 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
COPB2P35606 HLA-A-202ENST00000376806 1854 ntBASIC18.39■□□□□ 0.53
COPB2P35606 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
COPB2P35606 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPB2P35606 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
COPB2P35606 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.38■□□□□ 0.53
COPB2P35606 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
COPB2P35606 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COPB2P35606 AC079776.1-201ENST00000401540 1152 ntBASIC18.38■□□□□ 0.53
COPB2P35606 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.38■□□□□ 0.53
COPB2P35606 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.38■□□□□ 0.53
COPB2P35606 KRT17P8-201ENST00000540749 863 ntBASIC18.38■□□□□ 0.53
COPB2P35606 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.38■□□□□ 0.53
COPB2P35606 MIR6805-201ENST00000615055 62 ntBASIC18.38■□□□□ 0.53
COPB2P35606 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
COPB2P35606 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.38■□□□□ 0.53
COPB2P35606 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPB2P35606 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.38■□□□□ 0.53
COPB2P35606 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
COPB2P35606 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
COPB2P35606 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 AC005915.1-201ENST00000624912 2018 ntBASIC18.37■□□□□ 0.53
COPB2P35606 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.37■□□□□ 0.53
COPB2P35606 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 AC015936.2-201ENST00000593177 259 ntBASIC18.37■□□□□ 0.53
COPB2P35606 MIR8072-201ENST00000614241 80 ntBASIC18.37■□□□□ 0.53
COPB2P35606 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms