Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 MIR346-201ENST00000362234 95 ntBASIC17.06■□□□□ 0.32
RFC1P35251 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 AC142381.1-201ENST00000426099 345 ntBASIC17.06■□□□□ 0.32
RFC1P35251 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC1P35251 DNAJB3-201ENST00000446806 729 ntBASIC17.06■□□□□ 0.32
RFC1P35251 CEND1P1-201ENST00000451006 455 ntBASIC17.06■□□□□ 0.32
RFC1P35251 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC1P35251 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC1P35251 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC1P35251 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.06■□□□□ 0.32
RFC1P35251 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 MIR4321-201ENST00000592276 80 ntBASIC17.06■□□□□ 0.32
RFC1P35251 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.06■□□□□ 0.32
RFC1P35251 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFC1P35251 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFC1P35251 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RFC1P35251 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC1P35251 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 AC112482.1-201ENST00000492080 688 ntBASIC17.05■□□□□ 0.32
RFC1P35251 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 AP000842.3-202ENST00000569238 1080 ntBASIC17.05■□□□□ 0.32
RFC1P35251 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RFC1P35251 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
RFC1P35251 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
RFC1P35251 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
RFC1P35251 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RFC1P35251 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFC1P35251 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.04■□□□□ 0.32
RFC1P35251 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC1P35251 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RFC1P35251 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.04■□□□□ 0.32
RFC1P35251 GPX1P2-201ENST00000429271 606 ntBASIC17.04■□□□□ 0.32
RFC1P35251 YBX1P5-201ENST00000509441 847 ntBASIC17.04■□□□□ 0.32
RFC1P35251 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 AC010327.4-202ENST00000591484 748 ntBASIC17.04■□□□□ 0.32
RFC1P35251 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
RFC1P35251 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RFC1P35251 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC1P35251 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.04■□□□□ 0.32
RFC1P35251 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.04■□□□□ 0.32
RFC1P35251 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFC1P35251 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms