Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFC4P35249 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.08■□□□□ 0.81
RFC4P35249 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.08■□□□□ 0.81
RFC4P35249 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.08■□□□□ 0.81
RFC4P35249 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC4P35249 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC4P35249 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC4P35249 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.08■□□□□ 0.8
RFC4P35249 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC20.08■□□□□ 0.8
RFC4P35249 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.08■□□□□ 0.8
RFC4P35249 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC4P35249 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
RFC4P35249 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.08■□□□□ 0.8
RFC4P35249 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RFC4P35249 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RFC4P35249 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 MIR326-201ENST00000362220 95 ntBASIC20.07■□□□□ 0.8
RFC4P35249 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.07■□□□□ 0.8
RFC4P35249 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RFC4P35249 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC4P35249 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.07■□□□□ 0.8
RFC4P35249 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.07■□□□□ 0.8
RFC4P35249 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC4P35249 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC4P35249 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC4P35249 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.07■□□□□ 0.8
RFC4P35249 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.07■□□□□ 0.8
RFC4P35249 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.07■□□□□ 0.8
RFC4P35249 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.07■□□□□ 0.8
RFC4P35249 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.07■□□□□ 0.8
RFC4P35249 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RFC4P35249 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC4P35249 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFC4P35249 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFC4P35249 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC4P35249 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC4P35249 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC4P35249 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC4P35249 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC4P35249 AC023310.1-201ENST00000554836 735 ntBASIC20.06■□□□□ 0.8
RFC4P35249 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.06■□□□□ 0.8
RFC4P35249 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC4P35249 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 LARP4-220ENST00000615080 856 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC4P35249 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
RFC4P35249 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC4P35249 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RFC4P35249 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFC4P35249 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC4P35249 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RFC4P35249 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC4P35249 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC4P35249 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC4P35249 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC4P35249 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC4P35249 FAM86HP-204ENST00000513466 959 ntBASIC20.05■□□□□ 0.8
RFC4P35249 AP001258.2-201ENST00000529891 490 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms