Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MMP8P22894 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 AC026979.3-201ENST00000607315 403 ntBASIC16.95■□□□□ 0.3
MMP8P22894 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 AC009093.7-201ENST00000623853 1223 ntBASIC16.95■□□□□ 0.3
MMP8P22894 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP8P22894 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
MMP8P22894 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 REXO1L1P-202ENST00000608646 1974 ntBASIC16.95■□□□□ 0.3
MMP8P22894 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP8P22894 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP8P22894 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MMP8P22894 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP8P22894 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 AC254562.1-201ENST00000417586 456 ntBASIC16.94■□□□□ 0.3
MMP8P22894 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 SPDYE14P-201ENST00000442619 822 ntBASIC16.94■□□□□ 0.3
MMP8P22894 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.94■□□□□ 0.3
MMP8P22894 EEF1DP4-201ENST00000446006 880 ntBASIC16.94■□□□□ 0.3
MMP8P22894 AP006288.1-201ENST00000446065 395 ntBASIC16.94■□□□□ 0.3
MMP8P22894 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.94■□□□□ 0.3
MMP8P22894 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 AC018529.1-201ENST00000613063 361 ntBASIC16.94■□□□□ 0.3
MMP8P22894 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.94■□□□□ 0.3
MMP8P22894 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MMP8P22894 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP8P22894 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP8P22894 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MMP8P22894 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MMP8P22894 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 AC018892.3-201ENST00000623986 2499 ntBASIC16.93■□□□□ 0.3
MMP8P22894 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 RBPMS2P1-201ENST00000437762 623 ntBASIC16.93■□□□□ 0.3
MMP8P22894 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
MMP8P22894 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.93■□□□□ 0.3
MMP8P22894 BANF1P1-201ENST00000553684 263 ntBASIC16.93■□□□□ 0.3
MMP8P22894 AC026150.2-201ENST00000564693 1156 ntBASIC16.93■□□□□ 0.3
MMP8P22894 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP8P22894 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MMP8P22894 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MMP8P22894 AL139384.1-201ENST00000612143 3047 ntBASIC16.93■□□□□ 0.3
MMP8P22894 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MMP8P22894 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MMP8P22894 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.93■□□□□ 0.3
MMP8P22894 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP8P22894 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
MMP8P22894 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MMP8P22894 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.92■□□□□ 0.3
MMP8P22894 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MMP8P22894 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms