Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATP2B1P20020 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2B1P20020 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP2B1P20020 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2B1P20020 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2B1P20020 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 LINC00554-201ENST00000564841 3011 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2B1P20020 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 KRT18P13-201ENST00000400056 1290 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 DNAJB3-201ENST00000446806 729 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 SPDYE11-202ENST00000450699 704 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 CEND1P1-201ENST00000451006 455 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATP2B1P20020 SPDYE9P-201ENST00000570642 692 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.67■□□□□ 0.58
ATP2B1P20020 SPDYE10P-202ENST00000612005 668 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 SPDYE8P-202ENST00000612377 668 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2B1P20020 AC068587.6-202ENST00000641839 5619 ntBASIC18.67■□□□□ 0.58
ATP2B1P20020 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP2B1P20020 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
ATP2B1P20020 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2B1P20020 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B1P20020 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ATP2B1P20020 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2B1P20020 AC243562.1-201ENST00000560672 389 ntBASIC18.66■□□□□ 0.58
ATP2B1P20020 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 AC027307.2-201ENST00000591252 911 ntBASIC18.66■□□□□ 0.58
ATP2B1P20020 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.66■□□□□ 0.58
ATP2B1P20020 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2B1P20020 AC063926.3-201ENST00000624734 5658 ntBASIC18.66■□□□□ 0.58
ATP2B1P20020 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2B1P20020 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2B1P20020 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 AL603832.2-201ENST00000566195 2125 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP2B1P20020 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2B1P20020 AC112482.1-201ENST00000492080 688 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2B1P20020 AC005829.1-201ENST00000570002 483 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms