Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL3P10147 AL109936.8-201ENST00000641772 604 ntBASIC14.66□□□□□ -0.06
CCL3P10147 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL3P10147 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL3P10147 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
CCL3P10147 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 KRT8P37-201ENST00000451609 1420 ntBASIC14.66□□□□□ -0.06
CCL3P10147 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL3P10147 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL3P10147 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 BTBD7P1-201ENST00000447253 1453 ntBASIC14.65□□□□□ -0.06
CCL3P10147 AP001282.1-201ENST00000531301 1499 ntBASIC14.65□□□□□ -0.06
CCL3P10147 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CCL3P10147 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 FO393414.2-201ENST00000405153 598 ntBASIC14.65□□□□□ -0.06
CCL3P10147 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 SPTLC1P1-201ENST00000447199 261 ntBASIC14.65□□□□□ -0.06
CCL3P10147 SPDYE18-201ENST00000510091 1050 ntBASIC14.65□□□□□ -0.06
CCL3P10147 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL3P10147 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 AC104794.3-201ENST00000566840 1248 ntBASIC14.65□□□□□ -0.06
CCL3P10147 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL3P10147 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL3P10147 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.65□□□□□ -0.06
CCL3P10147 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL3P10147 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.65□□□□□ -0.06
CCL3P10147 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.65□□□□□ -0.06
CCL3P10147 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.65□□□□□ -0.06
CCL3P10147 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.65□□□□□ -0.06
CCL3P10147 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCL3P10147 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL3P10147 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL3P10147 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 MTHFR-217ENST00000641820 1569 ntBASIC14.64□□□□□ -0.07
CCL3P10147 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 AC006449.5-201ENST00000610658 2098 ntBASIC14.64□□□□□ -0.07
CCL3P10147 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL3P10147 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCL3P10147 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CCL3P10147 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms