Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.89□□□□□ -0.03
THBS1P07996 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
THBS1P07996 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
THBS1P07996 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
THBS1P07996 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
THBS1P07996 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.88□□□□□ -0.03
THBS1P07996 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 MCCD1P2-201ENST00000423228 335 ntBASIC14.88□□□□□ -0.03
THBS1P07996 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ADH5P3-201ENST00000433842 1137 ntBASIC14.88□□□□□ -0.03
THBS1P07996 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.88□□□□□ -0.03
THBS1P07996 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.88□□□□□ -0.03
THBS1P07996 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 AC098799.1-201ENST00000504752 800 ntBASIC14.88□□□□□ -0.03
THBS1P07996 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.88□□□□□ -0.03
THBS1P07996 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.88□□□□□ -0.03
THBS1P07996 AC061975.2-201ENST00000581722 295 ntBASIC14.88□□□□□ -0.03
THBS1P07996 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.88□□□□□ -0.03
THBS1P07996 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.88□□□□□ -0.03
THBS1P07996 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
THBS1P07996 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
THBS1P07996 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 FOXO1B-201ENST00000504678 1527 ntBASIC14.87□□□□□ -0.03
THBS1P07996 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.87□□□□□ -0.03
THBS1P07996 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.87□□□□□ -0.03
THBS1P07996 FAM58CP-201ENST00000435741 640 ntBASIC14.87□□□□□ -0.03
THBS1P07996 AC004967.1-201ENST00000453589 447 ntBASIC14.87□□□□□ -0.03
THBS1P07996 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.87□□□□□ -0.03
THBS1P07996 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
THBS1P07996 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.87□□□□□ -0.03
THBS1P07996 AC027307.2-201ENST00000591252 911 ntBASIC14.87□□□□□ -0.03
THBS1P07996 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms