Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RETP07949 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.27■□□□□ 0.2
RETP07949 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RETP07949 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RETP07949 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.27■□□□□ 0.2
RETP07949 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RETP07949 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.27■□□□□ 0.2
RETP07949 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RETP07949 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.27■□□□□ 0.2
RETP07949 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.27■□□□□ 0.2
RETP07949 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RETP07949 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.27■□□□□ 0.2
RETP07949 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 AC008735.3-201ENST00000596646 500 ntBASIC16.27■□□□□ 0.2
RETP07949 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RETP07949 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 AC073439.1-201ENST00000624121 1774 ntBASIC16.27■□□□□ 0.2
RETP07949 AC026691.1-201ENST00000602502 2017 ntBASIC16.27■□□□□ 0.2
RETP07949 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.27■□□□□ 0.2
RETP07949 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RETP07949 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RETP07949 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.27■□□□□ 0.19
RETP07949 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.27■□□□□ 0.19
RETP07949 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RETP07949 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RETP07949 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RETP07949 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RETP07949 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.26■□□□□ 0.19
RETP07949 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RETP07949 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RETP07949 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.26■□□□□ 0.19
RETP07949 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.26■□□□□ 0.19
RETP07949 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.26■□□□□ 0.19
RETP07949 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.26■□□□□ 0.19
RETP07949 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.26■□□□□ 0.19
RETP07949 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RETP07949 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
RETP07949 CYP2T1P-202ENST00000641596 2535 ntBASIC16.26■□□□□ 0.19
RETP07949 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.26■□□□□ 0.19
RETP07949 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.26■□□□□ 0.19
RETP07949 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RETP07949 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RETP07949 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RETP07949 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.26■□□□□ 0.19
RETP07949 AC092068.3-201ENST00000587894 2016 ntBASIC16.26■□□□□ 0.19
RETP07949 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RETP07949 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RETP07949 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.26■□□□□ 0.19
RETP07949 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RETP07949 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RETP07949 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RETP07949 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.25■□□□□ 0.19
RETP07949 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 CROCCP4-201ENST00000457096 498 ntBASIC16.25■□□□□ 0.19
RETP07949 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 AC023310.3-201ENST00000557027 670 ntBASIC16.25■□□□□ 0.19
RETP07949 AC100756.1-201ENST00000562736 682 ntBASIC16.25■□□□□ 0.19
RETP07949 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.25■□□□□ 0.19
RETP07949 AC138749.3-201ENST00000567691 622 ntBASIC16.25■□□□□ 0.19
RETP07949 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.25■□□□□ 0.19
RETP07949 AC103810.3-201ENST00000583567 96 ntBASIC16.25■□□□□ 0.19
RETP07949 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RETP07949 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms