Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 AC114501.2-201ENST00000439631 535 ntBASIC15.23■□□□□ 0.03
CTSBP07858 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSBP07858 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 AC243562.2-201ENST00000561247 970 ntBASIC15.23■□□□□ 0.03
CTSBP07858 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CTSBP07858 AC009118.2-201ENST00000613275 655 ntBASIC15.23■□□□□ 0.03
CTSBP07858 MIR6069-201ENST00000620069 79 ntBASIC15.23■□□□□ 0.03
CTSBP07858 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSBP07858 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSBP07858 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CTSBP07858 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 AP003680.1-201ENST00000598970 3660 ntBASIC15.22■□□□□ 0.03
CTSBP07858 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 PKD1P1-201ENST00000458669 6805 ntBASIC15.22■□□□□ 0.03
CTSBP07858 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 SPDYE19P-201ENST00000338590 713 ntBASIC15.22■□□□□ 0.03
CTSBP07858 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSBP07858 AC074338.1-201ENST00000416825 156 ntBASIC15.22■□□□□ 0.03
CTSBP07858 EEF1DP4-201ENST00000446006 880 ntBASIC15.22■□□□□ 0.03
CTSBP07858 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSBP07858 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 AP005018.1-201ENST00000525475 301 ntBASIC15.22■□□□□ 0.03
CTSBP07858 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 LINC01115-203ENST00000606068 577 ntBASIC15.22■□□□□ 0.03
CTSBP07858 AC004233.3-201ENST00000607794 1269 ntBASIC15.22■□□□□ 0.03
CTSBP07858 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CTSBP07858 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSBP07858 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSBP07858 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CTSBP07858 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 AC007541.1-201ENST00000570282 1469 ntBASIC15.21■□□□□ 0.03
CTSBP07858 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CTSBP07858 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSBP07858 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSBP07858 MTHFR-217ENST00000641820 1569 ntBASIC15.21■□□□□ 0.03
CTSBP07858 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSBP07858 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CTSBP07858 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 CRB3P1-201ENST00000449338 276 ntBASIC15.21■□□□□ 0.03
CTSBP07858 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 SDHAP3-202ENST00000515467 728 ntBASIC15.21■□□□□ 0.03
CTSBP07858 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTSBP07858 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSBP07858 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.21■□□□□ 0.03
CTSBP07858 AF228730.6-201ENST00000641497 218 ntBASIC15.21■□□□□ 0.03
CTSBP07858 AC084121.3-201ENST00000641716 218 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms