Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TPM3P06753 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.2■□□□□ 0.5
TPM3P06753 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.19■□□□□ 0.5
TPM3P06753 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.19■□□□□ 0.5
TPM3P06753 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 KRT16P4-201ENST00000453883 522 ntBASIC18.19■□□□□ 0.5
TPM3P06753 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.19■□□□□ 0.5
TPM3P06753 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.19■□□□□ 0.5
TPM3P06753 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.19■□□□□ 0.5
TPM3P06753 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TPM3P06753 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.19■□□□□ 0.5
TPM3P06753 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TPM3P06753 SNX18-202ENST00000343017 3140 ntBASIC18.18■□□□□ 0.5
TPM3P06753 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 PI4KAP1-204ENST00000612579 1703 ntBASIC18.18■□□□□ 0.5
TPM3P06753 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.18■□□□□ 0.5
TPM3P06753 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.18■□□□□ 0.5
TPM3P06753 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
TPM3P06753 AC139887.3-201ENST00000568585 713 ntBASIC18.18■□□□□ 0.5
TPM3P06753 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TPM3P06753 AP001269.4-201ENST00000609611 512 ntBASIC18.18■□□□□ 0.5
TPM3P06753 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TPM3P06753 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TPM3P06753 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
TPM3P06753 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
TPM3P06753 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TPM3P06753 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TPM3P06753 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.17■□□□□ 0.5
TPM3P06753 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 RBM17P3-201ENST00000417687 1192 ntBASIC18.17■□□□□ 0.5
TPM3P06753 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.17■□□□□ 0.5
TPM3P06753 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.17■□□□□ 0.5
TPM3P06753 AC106795.1-205ENST00000512851 1056 ntBASIC18.17■□□□□ 0.5
TPM3P06753 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms