Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 AGGF1P2-201ENST00000426656 2106 ntBASIC18.93■□□□□ 0.62
HLA-DOAP06340 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 RARRES2P5-201ENST00000564013 466 ntBASIC18.93■□□□□ 0.62
HLA-DOAP06340 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 AD000864.1-201ENST00000624076 2295 ntBASIC18.93■□□□□ 0.62
HLA-DOAP06340 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HLA-DOAP06340 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HLA-DOAP06340 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 OR8S1-201ENST00000310194 1080 ntBASIC18.92■□□□□ 0.62
HLA-DOAP06340 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 AL512384.1-201ENST00000406683 331 ntBASIC18.92■□□□□ 0.62
HLA-DOAP06340 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 GIMAP3P-201ENST00000495150 836 ntBASIC18.92■□□□□ 0.62
HLA-DOAP06340 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 LINC01115-203ENST00000606068 577 ntBASIC18.92■□□□□ 0.62
HLA-DOAP06340 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
HLA-DOAP06340 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HLA-DOAP06340 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HLA-DOAP06340 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.91■□□□□ 0.62
HLA-DOAP06340 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms