Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MT-ND1P03886 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MT-ND1P03886 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.32■□□□□ 0.04
MT-ND1P03886 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 AC007686.3-201ENST00000619017 3487 ntBASIC15.31■□□□□ 0.04
MT-ND1P03886 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.31■□□□□ 0.04
MT-ND1P03886 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ND1P03886 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ND1P03886 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.31■□□□□ 0.04
MT-ND1P03886 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ND1P03886 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 AF228730.7-201ENST00000641842 219 ntBASIC15.31■□□□□ 0.04
MT-ND1P03886 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.31■□□□□ 0.04
MT-ND1P03886 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 PI4KAP1-204ENST00000612579 1703 ntBASIC15.31■□□□□ 0.04
MT-ND1P03886 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MT-ND1P03886 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
MT-ND1P03886 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MT-ND1P03886 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MT-ND1P03886 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.3■□□□□ 0.04
MT-ND1P03886 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND1P03886 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.3■□□□□ 0.04
MT-ND1P03886 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.3■□□□□ 0.04
MT-ND1P03886 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 AL592424.1-201ENST00000563624 1536 ntBASIC15.3■□□□□ 0.04
MT-ND1P03886 AC023908.3-201ENST00000564211 3047 ntBASIC15.3■□□□□ 0.04
MT-ND1P03886 LINC01711-201ENST00000598340 967 ntBASIC15.3■□□□□ 0.04
MT-ND1P03886 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MT-ND1P03886 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MT-ND1P03886 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.3■□□□□ 0.04
MT-ND1P03886 AC091951.1-201ENST00000512854 2465 ntBASIC15.29■□□□□ 0.04
MT-ND1P03886 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms