Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL033527.5-201ENST00000641382 801 ntBASIC19.19■□□□□ 0.66
COL1A1P02452 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.19■□□□□ 0.66
COL1A1P02452 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL1A1P02452 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL1A1P02452 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COL1A1P02452 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COL1A1P02452 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.18■□□□□ 0.66
COL1A1P02452 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.18■□□□□ 0.66
COL1A1P02452 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A1P02452 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.18■□□□□ 0.66
COL1A1P02452 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.18■□□□□ 0.66
COL1A1P02452 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL1A1P02452 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A1P02452 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 AL596087.1-201ENST00000400979 1969 ntBASIC19.18■□□□□ 0.66
COL1A1P02452 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.18■□□□□ 0.66
COL1A1P02452 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
COL1A1P02452 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
COL1A1P02452 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
COL1A1P02452 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
COL1A1P02452 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 AL162726.2-201ENST00000438986 1017 ntBASIC19.17■□□□□ 0.66
COL1A1P02452 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 AC104596.2-201ENST00000512793 793 ntBASIC19.17■□□□□ 0.66
COL1A1P02452 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.17■□□□□ 0.66
COL1A1P02452 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC19.17■□□□□ 0.66
COL1A1P02452 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.17■□□□□ 0.66
COL1A1P02452 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.17■□□□□ 0.66
COL1A1P02452 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.17■□□□□ 0.66
COL1A1P02452 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 LTB4R2-202ENST00000528054 3092 ntBASIC19.17■□□□□ 0.66
COL1A1P02452 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COL1A1P02452 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL1A1P02452 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.16■□□□□ 0.66
COL1A1P02452 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.16■□□□□ 0.66
COL1A1P02452 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 AL442647.2-201ENST00000429864 857 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.16■□□□□ 0.66
COL1A1P02452 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.16■□□□□ 0.66
COL1A1P02452 BNIP3P42-201ENST00000454982 569 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 FAM86LP-201ENST00000478302 853 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.16■□□□□ 0.66
COL1A1P02452 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.16■□□□□ 0.66
COL1A1P02452 MIR5189-201ENST00000577370 114 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.16■□□□□ 0.66
COL1A1P02452 BNIP3P29-201ENST00000598302 571 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 AC233724.13-201ENST00000598383 410 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 AC011447.5-201ENST00000616168 564 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.16■□□□□ 0.66
COL1A1P02452 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 AC069224.1-201ENST00000566372 1715 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 REXO1L6P-201ENST00000603433 1515 ntBASIC19.16■□□□□ 0.66
COL1A1P02452 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.16■□□□□ 0.66
COL1A1P02452 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL1A1P02452 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms