Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZBED1O96006 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
ZBED1O96006 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.11■□□□□ 0.33
ZBED1O96006 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ZBED1O96006 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.1■□□□□ 0.33
ZBED1O96006 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZBED1O96006 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ZBED1O96006 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.1■□□□□ 0.33
ZBED1O96006 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.1■□□□□ 0.33
ZBED1O96006 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.1■□□□□ 0.33
ZBED1O96006 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.1■□□□□ 0.33
ZBED1O96006 MIR4453-201ENST00000584019 89 ntBASIC17.1■□□□□ 0.33
ZBED1O96006 AC003101.2-201ENST00000612557 442 ntBASIC17.1■□□□□ 0.33
ZBED1O96006 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.1■□□□□ 0.33
ZBED1O96006 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZBED1O96006 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.1■□□□□ 0.33
ZBED1O96006 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.09■□□□□ 0.33
ZBED1O96006 FAM86GP-201ENST00000448322 971 ntBASIC17.09■□□□□ 0.33
ZBED1O96006 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.09■□□□□ 0.33
ZBED1O96006 RFPL4AP1-201ENST00000530883 850 ntBASIC17.09■□□□□ 0.33
ZBED1O96006 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.09■□□□□ 0.33
ZBED1O96006 TUBB3P1-201ENST00000405796 1332 ntBASIC17.09■□□□□ 0.33
ZBED1O96006 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
ZBED1O96006 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.09■□□□□ 0.33
ZBED1O96006 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ZBED1O96006 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.09■□□□□ 0.33
ZBED1O96006 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.09■□□□□ 0.33
ZBED1O96006 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZBED1O96006 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZBED1O96006 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZBED1O96006 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
ZBED1O96006 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZBED1O96006 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.08■□□□□ 0.33
ZBED1O96006 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZBED1O96006 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.08■□□□□ 0.32
ZBED1O96006 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZBED1O96006 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZBED1O96006 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZBED1O96006 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ZBED1O96006 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZBED1O96006 AL353705.2-201ENST00000428243 662 ntBASIC17.08■□□□□ 0.32
ZBED1O96006 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.08■□□□□ 0.32
ZBED1O96006 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.08■□□□□ 0.32
ZBED1O96006 AC067863.1-201ENST00000494933 530 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms