Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.91■□□□□ 0.3
TRUB2O95900 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 AP005117.1-202ENST00000581724 1908 ntBASIC16.91■□□□□ 0.3
TRUB2O95900 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.91■□□□□ 0.3
TRUB2O95900 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.91■□□□□ 0.3
TRUB2O95900 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRUB2O95900 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRUB2O95900 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 AC046158.3-201ENST00000624947 2558 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRUB2O95900 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRUB2O95900 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRUB2O95900 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 AL353705.2-201ENST00000428243 662 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 CNN2P2-201ENST00000443536 909 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 CNN2P3-201ENST00000450201 906 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.9■□□□□ 0.3
TRUB2O95900 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.9■□□□□ 0.3
TRUB2O95900 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.9■□□□□ 0.3
TRUB2O95900 AC015911.4-201ENST00000588022 1070 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 AL136317.3-201ENST00000618497 906 ntBASIC16.9■□□□□ 0.3
TRUB2O95900 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.9■□□□□ 0.3
TRUB2O95900 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRUB2O95900 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.9■□□□□ 0.3
TRUB2O95900 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRUB2O95900 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.89■□□□□ 0.3
TRUB2O95900 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.89■□□□□ 0.3
TRUB2O95900 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
TRUB2O95900 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRUB2O95900 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRUB2O95900 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRUB2O95900 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRUB2O95900 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRUB2O95900 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.89■□□□□ 0.29
TRUB2O95900 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.89■□□□□ 0.29
TRUB2O95900 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.89■□□□□ 0.29
TRUB2O95900 AL645939.2-201ENST00000427340 991 ntBASIC16.89■□□□□ 0.29
TRUB2O95900 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.89■□□□□ 0.29
TRUB2O95900 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRUB2O95900 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.89■□□□□ 0.29
TRUB2O95900 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms