Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.27■□□□□ 0.04
SNX4O95219 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.27■□□□□ 0.04
SNX4O95219 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SNX4O95219 AL139011.1-202ENST00000642063 584 ntBASIC15.27■□□□□ 0.04
SNX4O95219 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX4O95219 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX4O95219 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SNX4O95219 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
SNX4O95219 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.27■□□□□ 0.03
SNX4O95219 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.27■□□□□ 0.03
SNX4O95219 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX4O95219 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX4O95219 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SNX4O95219 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNX4O95219 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.27■□□□□ 0.03
SNX4O95219 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SNX4O95219 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 AKAP8P1-201ENST00000434743 1349 ntBASIC15.26■□□□□ 0.03
SNX4O95219 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 AL355306.1-201ENST00000415580 579 ntBASIC15.26■□□□□ 0.03
SNX4O95219 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
SNX4O95219 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.26■□□□□ 0.03
SNX4O95219 RN7SL589P-201ENST00000481268 310 ntBASIC15.26■□□□□ 0.03
SNX4O95219 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.26■□□□□ 0.03
SNX4O95219 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 AP002414.2-201ENST00000591780 3365 ntBASIC15.26■□□□□ 0.03
SNX4O95219 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX4O95219 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SNX4O95219 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX4O95219 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX4O95219 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 AL391256.1-201ENST00000443260 1855 ntBASIC15.25■□□□□ 0.03
SNX4O95219 AC144831.1-201ENST00000573312 2656 ntBASIC15.25■□□□□ 0.03
SNX4O95219 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNX4O95219 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX4O95219 AP000344.2-201ENST00000512987 629 ntBASIC15.25■□□□□ 0.03
SNX4O95219 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.25■□□□□ 0.03
SNX4O95219 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX4O95219 RARRES2P8-201ENST00000566335 367 ntBASIC15.25■□□□□ 0.03
SNX4O95219 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNX4O95219 AC099522.2-201ENST00000607001 744 ntBASIC15.25■□□□□ 0.03
SNX4O95219 AC026120.1-201ENST00000611536 926 ntBASIC15.25■□□□□ 0.03
SNX4O95219 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SNX4O95219 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNX4O95219 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNX4O95219 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX4O95219 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SNX4O95219 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms