Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 ADH5P3-201ENST00000433842 1137 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 DNAJB3-201ENST00000446806 729 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.14■□□□□ 0.17
NDUFS3O75489 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC243562.1-201ENST00000560672 389 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS3O75489 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC024267.1-201ENST00000582320 895 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PAUPAR-201ENST00000630360 2965 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NDUFS3O75489 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
NDUFS3O75489 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 AC112504.1-201ENST00000623415 1841 ntBASIC16.14■□□□□ 0.17
NDUFS3O75489 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.14■□□□□ 0.17
NDUFS3O75489 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.14■□□□□ 0.17
NDUFS3O75489 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDUFS3O75489 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.13■□□□□ 0.17
NDUFS3O75489 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.13■□□□□ 0.17
NDUFS3O75489 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 ALG1L5P-201ENST00000482043 771 ntBASIC16.13■□□□□ 0.17
NDUFS3O75489 AC079140.1-201ENST00000508039 487 ntBASIC16.13■□□□□ 0.17
NDUFS3O75489 KRT8P48-201ENST00000515599 1220 ntBASIC16.13■□□□□ 0.17
NDUFS3O75489 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.13■□□□□ 0.17
NDUFS3O75489 AC005829.1-201ENST00000570002 483 ntBASIC16.13■□□□□ 0.17
NDUFS3O75489 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDUFS3O75489 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NDUFS3O75489 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.13■□□□□ 0.17
NDUFS3O75489 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms