Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF40O75150 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RNF40O75150 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.53■□□□□ 0.4
RNF40O75150 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF40O75150 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF40O75150 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF40O75150 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 AC105339.1-204ENST00000636249 355 ntBASIC17.53■□□□□ 0.4
RNF40O75150 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF40O75150 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF40O75150 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF40O75150 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF40O75150 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNF40O75150 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF40O75150 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 AL596087.1-201ENST00000400979 1969 ntBASIC17.52■□□□□ 0.4
RNF40O75150 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RNF40O75150 FAM45BP-202ENST00000592932 1624 ntBASIC17.52■□□□□ 0.4
RNF40O75150 AC092919.2-201ENST00000623631 1645 ntBASIC17.52■□□□□ 0.4
RNF40O75150 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 MTATP6P19-201ENST00000413797 659 ntBASIC17.52■□□□□ 0.4
RNF40O75150 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RNF40O75150 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.52■□□□□ 0.4
RNF40O75150 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF40O75150 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF40O75150 REXO1L3P-201ENST00000622202 1288 ntBASIC17.52■□□□□ 0.4
RNF40O75150 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF40O75150 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNF40O75150 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF40O75150 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RNF40O75150 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF40O75150 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF40O75150 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF40O75150 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.51■□□□□ 0.39
RNF40O75150 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 FAM185BP-201ENST00000443595 716 ntBASIC17.51■□□□□ 0.39
RNF40O75150 AL513480.1-201ENST00000451731 511 ntBASIC17.51■□□□□ 0.39
RNF40O75150 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF40O75150 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RNF40O75150 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF40O75150 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF40O75150 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF40O75150 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms