Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF11O60813 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRAMEF11O60813 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 REXO1L1P-202ENST00000608646 1974 ntBASIC16.33■□□□□ 0.2
PRAMEF11O60813 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRAMEF11O60813 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PRAMEF11O60813 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 FO393414.2-201ENST00000405153 598 ntBASIC16.32■□□□□ 0.2
PRAMEF11O60813 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 HIST3H2BA-201ENST00000436555 524 ntBASIC16.32■□□□□ 0.2
PRAMEF11O60813 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF11O60813 AL390955.2-201ENST00000603032 514 ntBASIC16.32■□□□□ 0.2
PRAMEF11O60813 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF11O60813 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 AL365203.3-201ENST00000609742 2057 ntBASIC16.31■□□□□ 0.2
PRAMEF11O60813 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF11O60813 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF11O60813 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 AC100757.3-201ENST00000622361 1406 ntBASIC16.3■□□□□ 0.2
PRAMEF11O60813 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF11O60813 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF11O60813 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms