Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 AC011495.1-201ENST00000498085 584 ntBASIC16.03■□□□□ 0.16
PCDHGA12O60330 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AL512384.1-201ENST00000406683 331 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGA12O60330 GNAQP1-201ENST00000444815 1067 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 INE1-201ENST00000456273 945 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 SERBP1P3-201ENST00000459980 809 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 RN7SL752P-201ENST00000463779 287 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 DOC2GP-202ENST00000514950 1163 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGA12O60330 AL162274.1-201ENST00000617191 1098 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 IGHV3-72-202ENST00000621503 303 ntBASIC16.02■□□□□ 0.16
PCDHGA12O60330 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 AC006449.5-201ENST00000610658 2098 ntBASIC16.02■□□□□ 0.15
PCDHGA12O60330 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 AC079328.2-201ENST00000561241 3354 ntBASIC16.02■□□□□ 0.15
PCDHGA12O60330 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA12O60330 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA12O60330 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 AC078925.2-201ENST00000624013 1973 ntBASIC16.01■□□□□ 0.15
PCDHGA12O60330 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA12O60330 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 AC010336.2-201ENST00000564226 506 ntBASIC16.01■□□□□ 0.15
PCDHGA12O60330 AC106886.1-201ENST00000568660 600 ntBASIC16.01■□□□□ 0.15
PCDHGA12O60330 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA12O60330 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms