Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SSSCA1O60232 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.25□□□□□ -0.29
SSSCA1O60232 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SSSCA1O60232 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SSSCA1O60232 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SSSCA1O60232 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SSSCA1O60232 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.24□□□□□ -0.29
SSSCA1O60232 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 AC022616.7-201ENST00000525383 220 ntBASIC13.24□□□□□ -0.29
SSSCA1O60232 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SSSCA1O60232 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 REXO1L3P-201ENST00000622202 1288 ntBASIC13.24□□□□□ -0.29
SSSCA1O60232 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.24□□□□□ -0.29
SSSCA1O60232 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SSSCA1O60232 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SSSCA1O60232 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SSSCA1O60232 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.23□□□□□ -0.29
SSSCA1O60232 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SSSCA1O60232 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
SSSCA1O60232 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms