Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
PDE6DO43924 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.58□□□□□ -0.4
PDE6DO43924 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 PMPCAP1-201ENST00000508114 1576 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.58□□□□□ -0.4
PDE6DO43924 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.58□□□□□ -0.4
PDE6DO43924 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 AL138966.2-201ENST00000621997 464 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 AC005622.1-201ENST00000636801 1703 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 ST20-AS1-201ENST00000560255 4223 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 AGAP7P-201ENST00000582299 2062 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 AGAP14-201ENST00000624701 2060 ntBASIC12.58□□□□□ -0.4
PDE6DO43924 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PDE6DO43924 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
PDE6DO43924 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.58□□□□□ -0.4
PDE6DO43924 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.58□□□□□ -0.4
PDE6DO43924 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PDE6DO43924 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 RN7SL606P-201ENST00000472779 293 ntBASIC12.57□□□□□ -0.4
PDE6DO43924 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.57□□□□□ -0.4
PDE6DO43924 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.57□□□□□ -0.4
PDE6DO43924 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 ITM2C-210ENST00000620962 501 ntBASIC12.57□□□□□ -0.4
PDE6DO43924 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 AC112693.3-201ENST00000624819 1983 ntBASIC12.57□□□□□ -0.4
PDE6DO43924 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
PDE6DO43924 C18orf15-201ENST00000623680 2534 ntBASIC12.57□□□□□ -0.4
PDE6DO43924 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PDE6DO43924 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms