Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.12■□□□□ 0.49
ACTN4O43707 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.12■□□□□ 0.49
ACTN4O43707 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 AC105233.2-201ENST00000523697 349 ntBASIC18.12■□□□□ 0.49
ACTN4O43707 AF228730.5-201ENST00000530288 346 ntBASIC18.12■□□□□ 0.49
ACTN4O43707 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 SPTSSB-204ENST00000617024 1292 ntBASIC18.12■□□□□ 0.49
ACTN4O43707 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
ACTN4O43707 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 NFIC-211ENST00000641145 8399 ntBASIC18.12■□□□□ 0.49
ACTN4O43707 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 AC144831.1-201ENST00000573312 2656 ntBASIC18.12■□□□□ 0.49
ACTN4O43707 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.12■□□□□ 0.49
ACTN4O43707 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.12■□□□□ 0.49
ACTN4O43707 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ACTN4O43707 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 HYMAI-201ENST00000635591 3347 ntBASIC18.11■□□□□ 0.49
ACTN4O43707 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 CICP13-201ENST00000422015 2789 ntBASIC18.11■□□□□ 0.49
ACTN4O43707 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ACTN4O43707 TFAMP1-201ENST00000412727 736 ntBASIC18.11■□□□□ 0.49
ACTN4O43707 AC026396.1-201ENST00000419388 421 ntBASIC18.11■□□□□ 0.49
ACTN4O43707 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.11■□□□□ 0.49
ACTN4O43707 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.11■□□□□ 0.49
ACTN4O43707 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.11■□□□□ 0.49
ACTN4O43707 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.11■□□□□ 0.49
ACTN4O43707 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.11■□□□□ 0.49
ACTN4O43707 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.11■□□□□ 0.49
ACTN4O43707 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.11■□□□□ 0.49
ACTN4O43707 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.11■□□□□ 0.49
ACTN4O43707 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 AC020658.6-201ENST00000623564 1870 ntBASIC18.11■□□□□ 0.49
ACTN4O43707 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
ACTN4O43707 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ACTN4O43707 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.1■□□□□ 0.49
ACTN4O43707 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
ACTN4O43707 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.1■□□□□ 0.49
ACTN4O43707 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ACTN4O43707 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 AL671277.1-201ENST00000429656 993 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.1■□□□□ 0.49
ACTN4O43707 AC243562.1-201ENST00000560672 389 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.1■□□□□ 0.49
ACTN4O43707 AC027307.2-201ENST00000591252 911 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.1■□□□□ 0.49
ACTN4O43707 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.1■□□□□ 0.49
ACTN4O43707 AC008267.7-201ENST00000624570 1194 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.1■□□□□ 0.49
ACTN4O43707 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.1■□□□□ 0.49
ACTN4O43707 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ACTN4O43707 SSR4P1-203ENST00000599569 2260 ntBASIC18.1■□□□□ 0.49
ACTN4O43707 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ACTN4O43707 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ACTN4O43707 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ACTN4O43707 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ACTN4O43707 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ACTN4O43707 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.09■□□□□ 0.49
ACTN4O43707 AC136621.1-201ENST00000624017 2304 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms