Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
XRCC2O43543 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.11□□□□□ -0.15
XRCC2O43543 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 DBET-201ENST00000630918 3363 ntBASIC14.11□□□□□ -0.15
XRCC2O43543 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.11□□□□□ -0.15
XRCC2O43543 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
XRCC2O43543 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
XRCC2O43543 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.1□□□□□ -0.15
XRCC2O43543 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
XRCC2O43543 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.1□□□□□ -0.15
XRCC2O43543 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.1□□□□□ -0.15
XRCC2O43543 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.1□□□□□ -0.15
XRCC2O43543 FAM86C2P-203ENST00000528684 1004 ntBASIC14.1□□□□□ -0.15
XRCC2O43543 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.1□□□□□ -0.15
XRCC2O43543 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 AC099522.2-201ENST00000607001 744 ntBASIC14.1□□□□□ -0.15
XRCC2O43543 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.1□□□□□ -0.15
XRCC2O43543 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
XRCC2O43543 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
XRCC2O43543 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 AL589702.1-201ENST00000641229 1509 ntBASIC14.1□□□□□ -0.15
XRCC2O43543 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
XRCC2O43543 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.1□□□□□ -0.15
XRCC2O43543 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
XRCC2O43543 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
XRCC2O43543 HAUS4P1-201ENST00000406739 1145 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 RN7SL589P-201ENST00000481268 310 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.09□□□□□ -0.15
XRCC2O43543 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.09□□□□□ -0.15
XRCC2O43543 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 AC091812.2-201ENST00000619081 385 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.09□□□□□ -0.15
XRCC2O43543 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 LINC02447-202ENST00000501888 2146 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 CDC14C-201ENST00000428251 1719 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 AC069224.1-201ENST00000566372 1715 ntBASIC14.09□□□□□ -0.15
XRCC2O43543 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
XRCC2O43543 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.09□□□□□ -0.15
XRCC2O43543 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.09□□□□□ -0.15
XRCC2O43543 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
XRCC2O43543 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms