Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.12■□□□□ 0.01
NTN3O00634 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NTN3O00634 MIR6869-201ENST00000619434 62 ntBASIC15.12■□□□□ 0.01
NTN3O00634 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NTN3O00634 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NTN3O00634 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NTN3O00634 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NTN3O00634 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NTN3O00634 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.12■□□□□ 0.01
NTN3O00634 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NTN3O00634 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NTN3O00634 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 AL607033.1-201ENST00000623900 1599 ntBASIC15.11■□□□□ 0.01
NTN3O00634 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 AC007551.1-201ENST00000457394 519 ntBASIC15.11■□□□□ 0.01
NTN3O00634 KRT18P43-201ENST00000469825 1281 ntBASIC15.11■□□□□ 0.01
NTN3O00634 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.11■□□□□ 0.01
NTN3O00634 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.11■□□□□ 0.01
NTN3O00634 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 AC005252.2-201ENST00000624630 1141 ntBASIC15.11■□□□□ 0.01
NTN3O00634 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NTN3O00634 FZD10-202ENST00000539839 3282 ntBASIC15.11■□□□□ 0.01
NTN3O00634 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 ALOX12P2-203ENST00000570921 1945 ntBASIC15.11■□□□□ 0.01
NTN3O00634 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
NTN3O00634 AL121723.1-201ENST00000445194 1519 ntBASIC15.11■□□□□ 0.01
NTN3O00634 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.11■□□□□ 0.01
NTN3O00634 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NTN3O00634 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.11■□□□□ 0.01
NTN3O00634 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
NTN3O00634 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.1■□□□□ 0.01
NTN3O00634 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
NTN3O00634 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NTN3O00634 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
NTN3O00634 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.1■□□□□ 0.01
NTN3O00634 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.1■□□□□ 0.01
NTN3O00634 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.1■□□□□ 0.01
NTN3O00634 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.1■□□□□ 0.01
NTN3O00634 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
NTN3O00634 AC093433.1-201ENST00000458048 571 ntBASIC15.1■□□□□ 0.01
NTN3O00634 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.1■□□□□ 0.01
NTN3O00634 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NTN3O00634 FTH1P14-201ENST00000482930 551 ntBASIC15.1■□□□□ 0.01
NTN3O00634 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.1■□□□□ 0.01
NTN3O00634 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms