Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.83□□□□□ -0.2
SDCBPO00560 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.83□□□□□ -0.2
SDCBPO00560 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SDCBPO00560 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 SLC22A20-204ENST00000530038 1673 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.82□□□□□ -0.2
SDCBPO00560 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.82□□□□□ -0.2
SDCBPO00560 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 IGHV3-65-201ENST00000523210 341 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 AC107918.2-201ENST00000530817 355 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 AC012640.2-201ENST00000561606 901 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.82□□□□□ -0.2
SDCBPO00560 AL773604.1-201ENST00000617417 272 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 AL031008.1-201ENST00000619963 541 ntBASIC13.82□□□□□ -0.2
SDCBPO00560 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.82□□□□□ -0.2
SDCBPO00560 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SDCBPO00560 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
SDCBPO00560 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SDCBPO00560 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SDCBPO00560 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.81□□□□□ -0.2
SDCBPO00560 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.81□□□□□ -0.2
SDCBPO00560 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.81□□□□□ -0.2
SDCBPO00560 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 AC092910.1-201ENST00000482027 1129 ntBASIC13.81□□□□□ -0.2
SDCBPO00560 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.81□□□□□ -0.2
SDCBPO00560 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.81□□□□□ -0.2
SDCBPO00560 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 AC087641.1-201ENST00000557561 1021 ntBASIC13.81□□□□□ -0.2
SDCBPO00560 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 FAM215A-202ENST00000632077 792 ntBASIC13.81□□□□□ -0.2
SDCBPO00560 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.81□□□□□ -0.2
SDCBPO00560 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SDCBPO00560 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.81□□□□□ -0.2
SDCBPO00560 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms