Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 AC138761.1-201ENST00000584393 385 ntBASIC18.15■□□□□ 0.5
DDX39AO00148 LINC02560-201ENST00000596379 459 ntBASIC18.15■□□□□ 0.5
DDX39AO00148 AC008738.7-201ENST00000609744 511 ntBASIC18.15■□□□□ 0.5
DDX39AO00148 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 AC087499.5-201ENST00000452760 1342 ntBASIC18.15■□□□□ 0.5
DDX39AO00148 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX39AO00148 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DDX39AO00148 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX39AO00148 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDX39AO00148 LINC02199-201ENST00000506655 2702 ntBASIC18.14■□□□□ 0.5
DDX39AO00148 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX39AO00148 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX39AO00148 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
DDX39AO00148 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DDX39AO00148 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX39AO00148 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.14■□□□□ 0.49
DDX39AO00148 RN7SL618P-201ENST00000477850 296 ntBASIC18.14■□□□□ 0.49
DDX39AO00148 SERBP1P5-201ENST00000510079 1181 ntBASIC18.14■□□□□ 0.49
DDX39AO00148 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX39AO00148 AC009407.1-201ENST00000568958 598 ntBASIC18.14■□□□□ 0.49
DDX39AO00148 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX39AO00148 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DDX39AO00148 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX39AO00148 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX39AO00148 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX39AO00148 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX39AO00148 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX39AO00148 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 AC009477.1-201ENST00000452936 217 ntBASIC18.13■□□□□ 0.49
DDX39AO00148 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX39AO00148 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.13■□□□□ 0.49
DDX39AO00148 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX39AO00148 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.13■□□□□ 0.49
DDX39AO00148 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX39AO00148 KRT8P12-202ENST00000472924 1397 ntBASIC18.13■□□□□ 0.49
DDX39AO00148 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms