Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSC5DA1L4H1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 MTX1P1-201ENST00000440904 838 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AC091804.1-201ENST00000486888 567 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 RPSAP36-202ENST00000494591 1261 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AP001258.2-201ENST00000529891 490 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 SLC25A24P2-201ENST00000415059 510 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AC023310.1-201ENST00000554836 735 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AC106872.11-201ENST00000605838 421 ntBASIC18.47■□□□□ 0.55
SSC5DA1L4H1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.47■□□□□ 0.55
SSC5DA1L4H1 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 ELK2AP-201ENST00000392510 1007 ntBASIC18.46■□□□□ 0.55
SSC5DA1L4H1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 HIST2H2BC-201ENST00000498492 580 ntBASIC18.46■□□□□ 0.55
SSC5DA1L4H1 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 AC145423.3-201ENST00000615987 467 ntBASIC18.46■□□□□ 0.55
SSC5DA1L4H1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSC5DA1L4H1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSC5DA1L4H1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.45■□□□□ 0.54
SSC5DA1L4H1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSC5DA1L4H1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms