Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.11□□□□□ -0.15
SHISA3A0PJX4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.11□□□□□ -0.15
SHISA3A0PJX4 FGD5P1-202ENST00000614866 2498 ntBASIC14.11□□□□□ -0.15
SHISA3A0PJX4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.11□□□□□ -0.15
SHISA3A0PJX4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AC005840.4-201ENST00000541242 2494 ntBASIC14.1□□□□□ -0.15
SHISA3A0PJX4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 AC012615.1-201ENST00000565797 1299 ntBASIC14.1□□□□□ -0.15
SHISA3A0PJX4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.1□□□□□ -0.15
SHISA3A0PJX4 GRK6P1-201ENST00000400595 1711 ntBASIC14.1□□□□□ -0.15
SHISA3A0PJX4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.09□□□□□ -0.15
SHISA3A0PJX4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms