Protein–RNA interactions for Protein: A0A0C4DH41

IGHV4-61, Immunoglobulin heavy variable 4-61, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-61A0A0C4DH41 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
IGHV4-61A0A0C4DH41 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-61A0A0C4DH41 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-61A0A0C4DH41 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-61A0A0C4DH41 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-61A0A0C4DH41 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 BTNL10-201ENST00000595971 695 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC133552.6-201ENST00000613406 534 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 MIR6775-201ENST00000617557 69 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 COX11-210ENST00000639671 696 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-61A0A0C4DH41 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AL442647.2-201ENST00000429864 857 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 KRT223P-202ENST00000449164 1292 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FAM86LP-201ENST00000478302 853 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 USP32P1-208ENST00000506594 1164 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AP005482.1-201ENST00000563722 1273 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AC133539.2-201ENST00000604757 467 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 CU634019.7-201ENST00000624153 1185 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 FP236241.2-201ENST00000624906 1185 ntBASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
IGHV4-61A0A0C4DH41 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms