Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGA9Q9Y5G4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC138969.3-201ENST00000546612 1459 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC138932.2-201ENST00000548268 1459 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC126755.4-201ENST00000549796 1459 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AL080243.2-201ENST00000418783 582 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ARSEP1-201ENST00000420443 635 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 RNA5SP410-201ENST00000516285 106 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 BANF1P1-201ENST00000553684 263 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AL079307.3-201ENST00000556114 283 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AL133215.2-201ENST00000609242 977 ntBASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGA9Q9Y5G4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PCDHGA9Q9Y5G4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms