Protein–RNA interactions for Protein: Q9UL33

TRAPPC2L, Trafficking protein particle complex subunit 2-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2LQ9UL33 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 AL513477.1-201ENST00000602865 2407 ntBASIC13.68□□□□□ -0.22
TRAPPC2LQ9UL33 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AP003680.1-201ENST00000598970 3660 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 MRPL3P1-201ENST00000400109 1033 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 HCG4B-203ENST00000450128 991 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 KRT18P34-201ENST00000488218 1270 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 KRT126P-201ENST00000549467 1181 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AC023141.13-201ENST00000604991 943 ntBASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAPPC2LQ9UL33 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 IGLL3P-201ENST00000412472 434 ntBASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 AC010507.1-201ENST00000633895 436 ntBASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRAPPC2LQ9UL33 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms