Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 SERBP1P2-201ENST00000436888 1164 ntBASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 AC024293.1-201ENST00000467930 498 ntBASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 AC006158.1-201ENST00000610661 249 ntBASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RIMBP3Q9UFD9 AL354751.1-201ENST00000412768 1863 ntBASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RIMBP3Q9UFD9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 POM121L8P-201ENST00000417732 1281 ntBASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 POM121L9P-203ENST00000441984 1285 ntBASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 LYPLA2P1-203ENST00000447689 696 ntBASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RIMBP3Q9UFD9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 ANKRD30BP2-201ENST00000435744 1610 ntBASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RIMBP3Q9UFD9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 RN7SL163P-201ENST00000583100 276 ntBASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 AC073592.2-201ENST00000623062 780 ntBASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RIMBP3Q9UFD9 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AL136309.1-201ENST00000403917 691 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AC130709.1-201ENST00000484779 1212 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AC009779.1-201ENST00000551138 283 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 LINC00431-202ENST00000636375 159 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AC090502.4-201ENST00000551714 1386 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AMT-204ENST00000427987 1646 ntTSL 5 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 RN7SL396P-201ENST00000471086 295 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AL627230.2-201ENST00000613254 655 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 AL136295.7-201ENST00000619226 1200 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 NAP1L6-202ENST00000641404 1222 ntBASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC24.86■■□□□ 1.57
RIMBP3Q9UFD9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RIMBP3Q9UFD9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms