Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.63■□□□□ 0.73
HMG20BQ9P0W2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 TERF1P3-201ENST00000505638 1227 ntBASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.62■□□□□ 0.73
HMG20BQ9P0W2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ZNF890P-202ENST00000530367 1156 ntBASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMG20BQ9P0W2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 COX20P2-201ENST00000452636 358 ntBASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 AL033527.5-202ENST00000641632 1098 ntBASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMG20BQ9P0W2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms