Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FBXO28Q9NVF7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 PCDHA12-202ENST00000613593 2588 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 KRT18P64-201ENST00000434946 1219 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TTTY23B-201ENST00000442790 549 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 RRP7BP-205ENST00000566851 833 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TMEM261P1-201ENST00000604899 340 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 AL162274.1-201ENST00000617191 1098 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 AL158212.4-201ENST00000624062 1286 ntBASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.46■□□□□ 0.55
FBXO28Q9NVF7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
FBXO28Q9NVF7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FBXO28Q9NVF7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 ACA64.2-201ENST00000459014 129 ntBASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 RN7SL399P-201ENST00000471648 279 ntBASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 KRT17P8-201ENST00000540749 863 ntBASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 AC092552.1-201ENST00000547243 906 ntBASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FBXO28Q9NVF7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms