Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 AC069224.1-201ENST00000566372 1715 ntBASIC14.79□□□□□ -0.04
HMG20AQ9NP66 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HMG20AQ9NP66 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HMG20AQ9NP66 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 AC016734.2-201ENST00000624325 1377 ntBASIC14.77□□□□□ -0.04
HMG20AQ9NP66 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HMG20AQ9NP66 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 FAM210CP-201ENST00000445714 574 ntBASIC14.77□□□□□ -0.05
HMG20AQ9NP66 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 AC009533.2-201ENST00000543664 586 ntBASIC14.77□□□□□ -0.05
HMG20AQ9NP66 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 AC111152.3-201ENST00000569699 673 ntBASIC14.77□□□□□ -0.05
HMG20AQ9NP66 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.77□□□□□ -0.05
HMG20AQ9NP66 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms