Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AC069224.1-201ENST00000566372 1715 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AL512652.2-201ENST00000625156 1716 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 LINC01144-201ENST00000626198 1710 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 MIR648-201ENST00000385046 94 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RCN1P2-201ENST00000398357 915 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AC104076.2-201ENST00000448912 469 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AL590326.2-201ENST00000625139 305 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
SND1-IT1Q9HBX3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
SND1-IT1Q9HBX3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PCGF3-213ENST00000620529 1899 ntBASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 AL590787.1-201ENST00000568856 1315 ntBASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC10.89□□□□□ -0.67
SND1-IT1Q9HBX3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms