Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC069148.1-201ENST00000608741 768 ntBASIC19.93■□□□□ 0.78
UPF2Q9HAU5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 GGTLC5P-201ENST00000617623 998 ntBASIC19.93■□□□□ 0.78
UPF2Q9HAU5 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF2Q9HAU5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 AL049597.2-201ENST00000565575 961 ntBASIC19.92■□□□□ 0.78
UPF2Q9HAU5 NPAP1P7-201ENST00000613027 823 ntBASIC19.92■□□□□ 0.78
UPF2Q9HAU5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 LINC02228-204ENST00000642115 2962 ntBASIC19.92■□□□□ 0.78
UPF2Q9HAU5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.92■□□□□ 0.78
UPF2Q9HAU5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AC006486.2-201ENST00000624246 2199 ntBASIC19.91■□□□□ 0.78
UPF2Q9HAU5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AC087388.1-201ENST00000571370 1112 ntBASIC19.91■□□□□ 0.78
UPF2Q9HAU5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AC008677.1-201ENST00000519230 1561 ntBASIC19.91■□□□□ 0.78
UPF2Q9HAU5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UPF2Q9HAU5 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF2Q9HAU5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms