Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COMMD4Q9H0A8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AP003680.1-201ENST00000598970 3660 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC092919.2-201ENST00000623631 1645 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 LINC01711-201ENST00000598340 967 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC025062.2-201ENST00000605477 670 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 AC107918.4-202ENST00000641623 219 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.35□□□□□ -0.11
COMMD4Q9H0A8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC023824.1-201ENST00000562945 2975 ntBASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC016027.1-202ENST00000607927 1699 ntBASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC006058.4-201ENST00000624016 1670 ntBASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC136632.2-201ENST00000512891 861 ntBASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 MIR1199-201ENST00000621445 119 ntBASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COMMD4Q9H0A8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms