Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 AC010947.1-201ENST00000623454 693 ntBASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLIRPQ9GZT3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 STARP1-201ENST00000397973 869 ntBASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 AC011467.2-201ENST00000598425 242 ntBASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLIRPQ9GZT3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC023024.2-201ENST00000623561 1993 ntBASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.22□□□□□ -0.13
SLIRPQ9GZT3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms