Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SLC25A1P1-201ENST00000528351 927 ntBASIC16.3■□□□□ 0.2
NDNQ99608 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NDNQ99608 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.3■□□□□ 0.2
NDNQ99608 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.3■□□□□ 0.2
NDNQ99608 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 AL009178.2-201ENST00000597278 2719 ntBASIC16.3■□□□□ 0.2
NDNQ99608 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NDNQ99608 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NDNQ99608 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.29■□□□□ 0.2
NDNQ99608 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.29■□□□□ 0.2
NDNQ99608 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.29■□□□□ 0.2
NDNQ99608 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.29■□□□□ 0.2
NDNQ99608 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.29■□□□□ 0.2
NDNQ99608 KRT19P2-202ENST00000557173 1012 ntBASIC16.29■□□□□ 0.2
NDNQ99608 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 AC016027.1-202ENST00000607927 1699 ntBASIC16.29■□□□□ 0.2
NDNQ99608 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NDNQ99608 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NDNQ99608 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NDNQ99608 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.29■□□□□ 0.2
NDNQ99608 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 LINC02447-202ENST00000501888 2146 ntBASIC16.28■□□□□ 0.2
NDNQ99608 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 CDC14C-201ENST00000428251 1719 ntBASIC16.28■□□□□ 0.2
NDNQ99608 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.28■□□□□ 0.2
NDNQ99608 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NDNQ99608 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.28■□□□□ 0.2
NDNQ99608 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.28■□□□□ 0.2
NDNQ99608 AL590627.1-203ENST00000421194 1026 ntBASIC16.28■□□□□ 0.2
NDNQ99608 FDX1P1-201ENST00000449115 551 ntBASIC16.28■□□□□ 0.2
NDNQ99608 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.28■□□□□ 0.2
NDNQ99608 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.28■□□□□ 0.2
NDNQ99608 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 AC109635.5-201ENST00000533593 962 ntBASIC16.28■□□□□ 0.2
NDNQ99608 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.28■□□□□ 0.2
NDNQ99608 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.28■□□□□ 0.2
NDNQ99608 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NDNQ99608 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms