Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCNX1Q96RV3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 ACTBP11-201ENST00000436287 1126 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AC133552.6-201ENST00000613406 534 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 CTBP2P5-201ENST00000454986 1264 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 BTNL10-201ENST00000595971 695 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 PCDHB18P-201ENST00000524813 2368 ntBASIC14.2□□□□□ -0.14
PCNX1Q96RV3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCNX1Q96RV3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TUBB1P2-201ENST00000422712 1306 ntBASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TUBB1P1-201ENST00000503144 1300 ntBASIC14.19□□□□□ -0.14
PCNX1Q96RV3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.19□□□□□ -0.14
PCNX1Q96RV3 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms